Merge StarDist Masks#
Features#
This new post-processing step allows to use StarDist segmentation on non-star-convex objects.
Instead of NMS, this post-processing naively merges masks together
Masks whos center points lie within another mask are added to that mask
Works in 2D and 3D
In 2D, it works on big and winding objects
Requirements#
A StarDist installation.
Installation#
You can install Merge StarDist Masks via pip from PyPI:
$ pip install merge-stardist-masks
Usage#
Please see the EXAMPLE in Usage for details.
Contributing#
Contributions are very welcome. To learn more, see the Contributor Guide.
License#
Distributed under the terms of the MIT license, Merge StarDist Masks is free and open source software.
Issues#
If you encounter any problems, please file an issue along with a detailed description.
Credits#
This project was generated from @cjolowicz’s Hypermodern Python Cookiecutter template.